CDS

Accession Number TCMCG068C05803
gbkey CDS
Protein Id KAG5573674.1
Location join(54613541..54613556,54613859..54614239,54614422..54614576,54614748..54614822,54614922..54615149,54615512..54615961,54616241..54616391,54617498..54617560,54618679..54618848,54618932..54619029,54619105..54619162,54619579..54619658,54619756..54619858,54619939..54620154)
Organism Solanum commersonii
locus_tag H5410_063440

Protein

Length 747aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA655804, BioSample:SAMN15755581
db_source JACXVP010000012.1
Definition hypothetical protein H5410_063440 [Solanum commersonii]
Locus_tag H5410_063440

EGGNOG-MAPPER Annotation

COG_category J
Description maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG_TC -
KEGG_Module M00177        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE br01610        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
ko03011        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K02937        [VIEW IN KEGG]
ko:K08819        [VIEW IN KEGG]
ko:K19933        [VIEW IN KEGG]
EC 2.7.11.22        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.7.11.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03010        [VIEW IN KEGG]
map03010        [VIEW IN KEGG]
GOs GO:0000172        [VIEW IN EMBL-EBI]
GO:0000184        [VIEW IN EMBL-EBI]
GO:0000447        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000463        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0001889        [VIEW IN EMBL-EBI]
GO:0002165        [VIEW IN EMBL-EBI]
GO:0002181        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003735        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0005844        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006612        [VIEW IN EMBL-EBI]
GO:0006613        [VIEW IN EMBL-EBI]
GO:0006614        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008097        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015934        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022625        [VIEW IN EMBL-EBI]
GO:0022626        [VIEW IN EMBL-EBI]
GO:0030016        [VIEW IN EMBL-EBI]
GO:0030017        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030687        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031099        [VIEW IN EMBL-EBI]
GO:0031100        [VIEW IN EMBL-EBI]
GO:0031672        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035073        [VIEW IN EMBL-EBI]
GO:0035210        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0042788        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043292        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044391        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044445        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044449        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045047        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048732        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061008        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070972        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072599        [VIEW IN EMBL-EBI]
GO:0072657        [VIEW IN EMBL-EBI]
GO:0090150        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097421        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905267        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGCTAGCATATGCCCTGTATCTAACTAAATCTACGAATGGTACGTCAGGAATTAGAACGTATGATGGCCTCGAGAGCTGCATACTGAACAGTCAGTCTTATGACAATGAAAGTGCCAATAGCAGAGTTGATGTTGGTGTTACAGATTCTCTATATGATGACGACTCGAGTAGCTCTTCTAGCAACAATGTTTTTGGATCATTTTTATCTCACTGGACAACAAGCCCTCAACATTTTTATGTGAACGAAAAAACTGGTTATACAACACAACTTTCAGATGTGGAAATGATGAAAGAGAGGTTTGCAAAGTTGTTGCTTGGGGAGGATGTGACCGGAGGAAGCAAGGGGGTTTCTACTGCATTAGCATTGTCCAATGCCATTACAAATCTTGCAGCGTCTGTGTTTGGAGAGCTGTGGAAATTGGAGCCACTTGCAGAGGAACGAAAGATGAAATGGAGAACGGAAATGGATTGGTTACTCTCACCTACCAATCATATGATTGAGTTAGTTCCTGCAAGACAAAGTGGTTCGAATGGCCAAAGTTTGGAGATAATGACACCAAAAGTTCGTGCTGACATCCATATGAATCTTCCAGCACTTCGGAAATTGGATTCGATGCTTCTTGAAACGCTGGATTCAATGGTTAGTACTGAGTTTTGGTATACGGAAGTGAGTTCCCGAGCAGAAGGAAAGAGCATTAAGTGGTGTCTTCCTTCACCTAAGGTACCCGTAGCTGGACTCTCTGAAGTTGAAAGAAAGAAATTGGTGAATCAAGGGAAATTGGTGAATCAAATATTTAAGGCAGCAAAAGCTATCAATGAAAATGTCTTGGCTGAAATGCCTGTTCCAACATGTAAAATCTTTATACTGTTGATGTATGTAACTCATATCCTTTGCTTTTATGGTGTACTTAATTTGTTGAAATTGCTCAATTTGATCGATTCATTCCTGCAGTCTAGCAGGACAAGCCTCGGGGACAACCTTTATAGGATCCTGACTGCAAAATCAACAACTGCTGAGGAAATGTTCAATTCTTTGAACTTGAAATCTGAAAACAGCGCGGTTGAAGTTGTTAACAGGTTAGAAGGATCCATTCTTGCTTGGAAAGAGAGAATAACTGATCAAGCTAGCGGAAAATCTCCAGCTCGAAGATCTTGGTCTTTTGGAAAAGATCCAATATCTGAGCTAGACAAATTGGAGGTCTTATTGAGCCAAGCAGAAGCTCTTGTACAACAGCTCAAATTTGAATATCCTAACCTTCCACAGACGTTCCTCAACGTCACAAAAATCCAGTATGGCATGGACATTGGACATTTGATTATGGAAGCATACTCTCGAGTTCTCTTAAACTTAGCATACAACATTCTTACACGGATAGGAGAAGTTTTGCAAGTAGATTTCTCGAGCAACCTCAACTCACCTGCAGCTACTGTCTACTCGAGTCCTATATCGAGTCACAGTCGCATTCCCTCTTGCCCTCCCGCCGATCAGAGCCGTTCTCTTCAACAATTTCAAGAGATGGGTGAAACACCAGTTCCAGAGTCAGTCTTGAAGAAGCAGAAGAGGAGTGAGGAATGGGCTCTTGCAAAGAAGCAAGAACTTGAATCTGCAAAGAAGAAGAATGCTGAGAACAGGAAATTGATCTACAACAGGGCAAAGCTGTATGCAAAGGAGTACGCAGAACAGGACAAGGAATTGATCCGTTTGAAACGCGAGGCTAGATTGAAAGGTGGTTTCTATGTGGATCCTGAGGCAAAGTTGTTGTTTATCATCAGGATACGCGGGATTAACGCTATGCCCCCACAGACCAAAAAGATTTTGCAGCTACTACGTTTGCGCCAGATCTTTAATGGGGTCTTTTTGAAAGTTAACAAAGCCACAGTGAACATGTTGCATAGGGTTGAACCTTACGTAACCTATGGTTACCCAAACCTAAAGAGTGTTAGGGAATTGATCTACAAAAGAGGTTATGGAAAGCTTGACAAGCAGAGAATTCCTTTAACCGACAATTCCGTCATTGAGCAGGGATTGGGCAAACATGGAATTATCTGTGCTGAAGACCTTGTCCACGAGATCATGACTGTCGGGCCCAGCTTCAAGCAGGCCAACAACTTCCTATGGCCATTCCAGCTGAAGGCACCTTTGGGTGGACTCAAGAAGAAGAGAAATCACTACGTTGAAGGTGGTGATGCTGGTAACCGCGAGAACTTCATTAATGAACTTATCAGGAGGATGAACTAG
Protein:  
MQLAYALYLTKSTNGTSGIRTYDGLESCILNSQSYDNESANSRVDVGVTDSLYDDDSSSSSSNNVFGSFLSHWTTSPQHFYVNEKTGYTTQLSDVEMMKERFAKLLLGEDVTGGSKGVSTALALSNAITNLAASVFGELWKLEPLAEERKMKWRTEMDWLLSPTNHMIELVPARQSGSNGQSLEIMTPKVRADIHMNLPALRKLDSMLLETLDSMVSTEFWYTEVSSRAEGKSIKWCLPSPKVPVAGLSEVERKKLVNQGKLVNQIFKAAKAINENVLAEMPVPTCKIFILLMYVTHILCFYGVLNLLKLLNLIDSFLQSSRTSLGDNLYRILTAKSTTAEEMFNSLNLKSENSAVEVVNRLEGSILAWKERITDQASGKSPARRSWSFGKDPISELDKLEVLLSQAEALVQQLKFEYPNLPQTFLNVTKIQYGMDIGHLIMEAYSRVLLNLAYNILTRIGEVLQVDFSSNLNSPAATVYSSPISSHSRIPSCPPADQSRSLQQFQEMGETPVPESVLKKQKRSEEWALAKKQELESAKKKNAENRKLIYNRAKLYAKEYAEQDKELIRLKREARLKGGFYVDPEAKLLFIIRIRGINAMPPQTKKILQLLRLRQIFNGVFLKVNKATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIPLTDNSVIEQGLGKHGIICAEDLVHEIMTVGPSFKQANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN